Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 ESRRAP1-201ENST00000400596 1257 ntBASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 TSPY21P-201ENST00000433481 731 ntBASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 AL160286.2-201ENST00000567150 934 ntBASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-4A0A1B0GX49 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 KRT16P5-201ENST00000455284 522 ntBASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-4A0A1B0GX49 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 FEM1AP3-201ENST00000403722 1741 ntBASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 IRX1P1-201ENST00000438849 1838 ntBASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-4A0A1B0GX49 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms