Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 KRT18P16-201ENST00000510337 1294 ntBASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 UNC93B5-201ENST00000530315 699 ntBASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 BCL2-203ENST00000589955 5011 ntBASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TRAV4A0A0B4J268 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 POM121L13P-201ENST00000422362 380 ntBASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV4A0A0B4J268 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 AC005332.8-201ENST00000622750 2735 ntBASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 ID1-201ENST00000376105 1233 ntBASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV4A0A0B4J268 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms