Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC007322.1-201ENST00000426983 750 ntBASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 KRT18P5-201ENST00000436075 1291 ntBASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV5A0A0B4J249 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 GPX1P1-201ENST00000388829 606 ntBASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV5A0A0B4J249 Z98044.1-201ENST00000632503 1764 ntBASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 LSM12P1-201ENST00000411836 588 ntBASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AC231657.2-201ENST00000624556 255 ntBASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AL512353.2-201ENST00000448759 1962 ntBASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV5A0A0B4J249 IRX1P1-201ENST00000438849 1838 ntBASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV5A0A0B4J249 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms