Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AC004911.1-201ENST00000416316 871 ntBASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 PTBP1P-201ENST00000554374 1601 ntBASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 AL133373.2-201ENST00000623187 2828 ntBASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 AL355472.2-201ENST00000422958 438 ntBASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 AC105036.2-201ENST00000569468 176 ntBASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV8-4A0A0B4J246 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 AP001271.2-201ENST00000624018 1556 ntBASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 AC092437.1-201ENST00000624794 1048 ntBASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 PCDHB18P-201ENST00000524813 2368 ntBASIC13.43□□□□□ -0.26
TRAV8-4A0A0B4J246 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 AC009237.14-201ENST00000609975 1594 ntBASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-4A0A0B4J246 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms