Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 AC016769.1-201ENST00000409132 1010 ntBASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 CYP2T3P-201ENST00000601990 817 ntBASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-1A0A0B4J241 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AL355472.2-201ENST00000422958 438 ntBASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AC034268.1-201ENST00000441047 882 ntBASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AL589743.5-201ENST00000616611 1050 ntBASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 PKD1P5-201ENST00000532415 10291 ntBASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AC068338.2-201ENST00000563278 1430 ntBASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 AL161938.1-201ENST00000569833 2180 ntBASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-1A0A0B4J241 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms