Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AL355802.2-201ENST00000402069 882 ntBASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 UNC93B5-201ENST00000530315 699 ntBASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AL049812.1-201ENST00000432563 2267 ntBASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FP475955.4-201ENST00000623131 1990 ntBASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms