Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGKV2-28A0A075B6P5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 AC087633.2-202ENST00000565166 1439 ntBASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.69□□□□□ -0.38
IGKV2-28A0A075B6P5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 AC067852.2-201ENST00000590513 2313 ntBASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
IGKV2-28A0A075B6P5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms