Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 AC091812.1-201ENST00000432235 1948 ntBASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ZNF806-201ENST00000438300 1774 ntBASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 AC100778.3-201ENST00000580060 1750 ntBASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 MAPK10-304ENST00000641341 3984 ntBASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 AL391684.1-202ENST00000641293 1636 ntBASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LCE3DQ9BYE3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AC109780.1-201ENST00000451768 1344 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AC144833.1-201ENST00000567953 4089 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ASNSP1-201ENST00000518311 1939 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AL049555.1-201ENST00000562834 1933 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AC010733.2-201ENST00000589496 5702 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 VTRNA3-1P-201ENST00000362552 102 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RNU4-44P-201ENST00000363050 141 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RNU1-21P-201ENST00000363327 163 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RNU1-146P-201ENST00000364015 165 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RNU6-450P-201ENST00000364654 107 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RN7SKP186-201ENST00000365371 303 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 SNORA70.5-201ENST00000365519 135 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 SNORA51.7-201ENST00000384171 134 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 SNORA51.8-201ENST00000384234 132 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 Y_RNA.473-201ENST00000384333 102 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 MIR578-201ENST00000384828 96 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 MIR301A-201ENST00000385261 86 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 U3.43-201ENST00000410734 213 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 RN7SKP268-201ENST00000411107 316 ntBASIC1.68□□□□□ -2.14
LCE3DQ9BYE3 CYCSP33-201ENST00000414485 327 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms