Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.6□□□□□ -1.35
LRCH3Q96II8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LRCH3Q96II8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
LRCH3Q96II8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LRCH3Q96II8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.6□□□□□ -1.35
LRCH3Q96II8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.6□□□□□ -1.35
LRCH3Q96II8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 HSPA8P4-201ENST00000511877 1920 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 RNY4P28-201ENST00000365281 93 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 U3.42-201ENST00000408746 214 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 RPL19P1-201ENST00000411635 428 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC017079.2-201ENST00000416102 485 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC093655.2-201ENST00000425735 631 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC126120.1-201ENST00000431082 470 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 RPS11P7-201ENST00000442125 465 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 COX6CP14-201ENST00000469580 174 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 RN7SL432P-201ENST00000484057 298 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC005726.1-201ENST00000494679 427 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC072052.1-201ENST00000496556 306 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 MRPS18CP4-201ENST00000535821 231 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 MIR4646-201ENST00000580775 63 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 AL158032.1-201ENST00000605401 106 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AL136131.3-201ENST00000607600 188 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AL589994.2-201ENST00000621124 579 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 AL596275.2-204ENST00000641628 552 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.59□□□□□ -1.35
LRCH3Q96II8 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LRCH3Q96II8 AC107021.2-201ENST00000567714 2095 ntBASIC6.59□□□□□ -1.35
LRCH3Q96II8 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
LRCH3Q96II8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
LRCH3Q96II8 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.59□□□□□ -1.36
LRCH3Q96II8 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LRCH3Q96II8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LRCH3Q96II8 LINC01963-201ENST00000562038 3148 ntBASIC6.59□□□□□ -1.36
LRCH3Q96II8 LINC02555-201ENST00000563933 1951 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 U8.4-201ENST00000363626 134 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 RNU6-153P-201ENST00000364422 104 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 Y_RNA.581-201ENST00000391017 97 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL023284.3-201ENST00000407767 334 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL713922.1-201ENST00000416477 747 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AC022022.1-201ENST00000430304 178 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 CR769767.1-201ENST00000436337 346 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 CEACAMP7-201ENST00000444105 496 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 RN7SL561P-201ENST00000488553 281 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 HMGB1P21-201ENST00000502313 581 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 ACA59.1-201ENST00000515966 143 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL049872.1-201ENST00000556323 322 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL158827.2-201ENST00000602494 330 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AC091768.1-201ENST00000609258 930 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL591516.1-201ENST00000611326 274 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 MIR6837-201ENST00000620884 64 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL691447.3-201ENST00000635020 330 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 AL596275.2-208ENST00000641192 594 ntBASIC6.58□□□□□ -1.36
LRCH3Q96II8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LRCH3Q96II8 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LRCH3Q96II8 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms