Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC092628.2-201ENST00000622492 339 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 ZNF734P-201ENST00000419494 1534 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 PNPT1P2-201ENST00000456768 2050 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 MIR195-201ENST00000385194 87 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC234775.1-201ENST00000454247 670 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 HMGB1P25-201ENST00000468402 607 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 EEF1B2P4-201ENST00000551398 348 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC068313.1-201ENST00000604028 1008 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC007256.1-201ENST00000392253 2765 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.142-201ENST00000363491 102 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 AC010480.1-201ENST00000624823 684 ntBASIC1.09□□□□□ -2.23
MACF1Q9UPN3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
MACF1Q9UPN3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 OR4K11P-201ENST00000431829 904 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 RN7SKP49-201ENST00000516675 260 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 AC087854.1-201ENST00000519706 414 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 MRPS35P3-201ENST00000603189 709 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 PGBD4P6-201ENST00000421501 610 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 AC008083.4-201ENST00000615076 444 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 MIR1291-201ENST00000627649 87 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 AL161431.1-201ENST00000618966 4205 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 Z99497.1-201ENST00000421282 135 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 RPL30P3-201ENST00000424262 333 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 ELOCP23-201ENST00000452014 332 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 SNORA70.19-201ENST00000516717 90 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 SCARNA20.6-201ENST00000517251 106 ntBASIC1.09□□□□□ -2.24
MACF1Q9UPN3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
MACF1Q9UPN3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MIR93-201ENST00000385024 80 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 NDUFB4P6-201ENST00000436819 366 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AP001521.1-201ENST00000609150 300 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms