Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 LSM3P2-201ENST00000551246 273 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 RN7SL708P-201ENST00000580952 299 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 uc_338.5-201ENST00000611839 155 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 AL121612.2-201ENST00000612261 482 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 TPTEP1-208ENST00000636884 213 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC12P31275 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 PABPC1P7-201ENST00000413177 1513 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 AC244517.1-201ENST00000606030 2086 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC12P31275 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC12P31275 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC12P31275 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 Y_RNA.615-201ENST00000410769 117 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RN7SKP17-201ENST00000411242 351 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RN7SKP279-201ENST00000411383 298 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AL138785.1-201ENST00000425821 331 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 AL772161.1-201ENST00000439130 476 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 MTND1P18-201ENST00000448191 573 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AL162388.1-201ENST00000450912 352 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 HMGB3P21-201ENST00000452483 547 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 snoU109.4-201ENST00000458953 143 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC108161.1-201ENST00000461060 402 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RPL7L1P8-201ENST00000469911 741 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RPL7P19-201ENST00000469948 618 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RPS21P4-201ENST00000487122 248 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC135721.1-201ENST00000497954 479 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC12P31275 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RN7SKP219-201ENST00000516825 296 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RNU6-64P-201ENST00000517119 105 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RNU6-1314P-201ENST00000517139 104 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC087241.2-201ENST00000535801 324 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 HPRT1P3-201ENST00000539521 576 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 CR383656.7-201ENST00000548164 174 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 MIR4775-201ENST00000581168 75 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 AC067852.4-201ENST00000590314 478 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC078795.3-201ENST00000602913 472 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AL031176.1-201ENST00000604554 466 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AL050343.2-201ENST00000607338 280 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AC090510.2-201ENST00000617465 629 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 AL161637.1-201ENST00000622380 412 ntBASIC4.91□□□□□ -1.62
HOXC12P31275 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC12P31275 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC12P31275 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC12P31275 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
HOXC12P31275 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC12P31275 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HOXC12P31275 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC12P31275 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC12P31275 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC12P31275 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HOXC12P31275 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC12P31275 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.62
HOXC12P31275 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC12P31275 AC027287.1-201ENST00000553115 1453 ntBASIC4.9□□□□□ -1.62
HOXC12P31275 AL121886.1-201ENST00000358609 435 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 RNA5SP183-201ENST00000362452 119 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RNU1-136P-201ENST00000384181 164 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RNU6-821P-201ENST00000390995 107 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AL009179.1-201ENST00000406085 265 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RNA5SP487-201ENST00000410186 122 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RN7SKP213-201ENST00000410746 298 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RNU6-1148P-201ENST00000410992 104 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RNA5SP107-201ENST00000411358 122 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 MTND3P8-201ENST00000412909 339 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC12P31275 CHEK2P3-201ENST00000416118 248 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 AL590762.4-201ENST00000425885 253 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms