Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RN7SKP244-201ENST00000516513 307 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RNU6-506P-201ENST00000516553 94 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC068587.4-201ENST00000533893 186 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 HMGB3P26-201ENST00000560051 582 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC234778.2-201ENST00000566241 354 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AP001180.3-201ENST00000582221 145 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MIR4307-201ENST00000582802 84 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MAGOH2P-202ENST00000584384 429 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AF250324.2-201ENST00000608299 610 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC020634.1-201ENST00000608701 549 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC131902.3-201ENST00000611767 581 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC024941.1-201ENST00000612250 334 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC091834.1-201ENST00000614543 472 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RNU6-156P-201ENST00000621869 107 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 OR5AK4P-201ENST00000635912 903 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 U6.101-201ENST00000637707 76 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MIR492-201ENST00000638676 116 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 DCAF13P1-201ENST00000495256 1330 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 AL136964.1-201ENST00000622038 2990 ntBASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 AC006378.2-201ENST00000623178 2476 ntBASIC3.59□□□□□ -1.84
C9orf139Q6ZV77 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 ZNF33CP-201ENST00000432492 2030 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC011978.2-201ENST00000569835 2054 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AL592182.3-201ENST00000642132 3304 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 RNA5SP391-201ENST00000363456 119 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 Y_RNA.248-201ENST00000364501 109 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 RNU6-952P-201ENST00000391164 108 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 EIF5P1-201ENST00000400019 1231 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 SNORA11-201ENST00000408789 128 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 Y_RNA.598-201ENST00000410480 95 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 Z97055.1-201ENST00000419730 712 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AL139415.2-201ENST00000431968 163 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC109583.1-201ENST00000432156 268 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 RPS3AP54-201ENST00000435535 734 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 MTND5P14-201ENST00000441481 1267 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 TDGF1P1-201ENST00000445734 527 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 USP9YP12-201ENST00000450481 570 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 BTF3P5-201ENST00000457252 467 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 RN7SL41P-201ENST00000476144 297 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC108022.1-201ENST00000493466 478 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC105252.1-201ENST00000503089 286 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 PARP4P3-201ENST00000510265 317 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC025884.1-201ENST00000556034 378 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 HSPE1P3-201ENST00000559254 309 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AGGF1P8-201ENST00000562979 1000 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 AC067852.4-201ENST00000590314 478 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 IMMP1LP1-201ENST00000605170 488 ntBASIC3.58□□□□□ -1.84
C9orf139Q6ZV77 BCRP9-201ENST00000605312 388 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms