Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 THAP12P5-201ENST00000405864 2275 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 RNA5SP305-201ENST00000362665 119 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 RNU6-1032P-201ENST00000384100 107 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 SNORA16A-201ENST00000384342 137 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 MCFD2P1-201ENST00000417812 300 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL590609.2-201ENST00000421430 368 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC096644.2-201ENST00000429278 159 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC073465.2-201ENST00000440938 498 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 RPS11P7-201ENST00000442125 465 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 ELOCP24-201ENST00000456370 334 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 Y_RNA.653-201ENST00000459091 95 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC006463.2-201ENST00000473326 348 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 RPL21P99-201ENST00000480369 423 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC007686.1-201ENST00000488511 463 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC104564.1-201ENST00000493028 407 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC016559.2-201ENST00000510759 359 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 RNU6-864P-201ENST00000516256 108 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 SUMO2P20-201ENST00000520803 283 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AP001922.4-201ENST00000526967 290 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 GSTP1P1-201ENST00000548078 319 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 OR4T1P-201ENST00000554933 911 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC040958.1-201ENST00000561102 201 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 TVP23CP2-201ENST00000571473 623 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AP001029.3-201ENST00000588063 596 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC022893.3-201ENST00000607665 437 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL391813.2-201ENST00000609113 322 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 AL162373.1-201ENST00000620433 407 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 IGKV7-3-201ENST00000357453 298 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 Y_RNA.5-201ENST00000362334 102 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 RNU6-1013P-201ENST00000384180 107 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 Y_RNA.574-201ENST00000384766 95 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 RNU6-193P-201ENST00000410977 107 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 RNU6-272P-201ENST00000411028 104 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 RPL37P10-201ENST00000412884 288 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC074085.1-201ENST00000413598 418 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC008267.5-201ENST00000424928 265 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 RPL12P17-201ENST00000432393 498 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 DDX3P2-201ENST00000446138 111 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 MIR2053-201ENST00000459295 91 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 GMFBP1-201ENST00000467831 427 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 RN7SL447P-201ENST00000494711 245 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 RNU6-406P-201ENST00000516470 107 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 RNU6-273P-201ENST00000516937 96 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 HMGB1P19-201ENST00000517578 577 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC107934.1-201ENST00000522215 217 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 AC004696.1-201ENST00000614345 607 ntBASIC5.61□□□□□ -1.51
RNF43Q68DV7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms