Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC007390.2-201ENST00000606229 3803 ntBASIC3.92□□□□□ -1.78
CACNA1FO60840 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.92□□□□□ -1.78
CACNA1FO60840 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CACNA1FO60840 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 MTND5P24-201ENST00000438892 1767 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 RNU6-805P-201ENST00000365643 106 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AL603865.2-201ENST00000401679 213 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 HMGB1P49-201ENST00000418882 569 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.91□□□□□ -1.78
CACNA1FO60840 SNORA59A-201ENST00000459326 152 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC004801.2-202ENST00000463559 283 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 SCARNA13-201ENST00000516672 275 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 OSBPL9P5-201ENST00000542581 171 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC009097.3-201ENST00000563557 1018 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 FAM106CP-201ENST00000582212 507 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC245100.7-201ENST00000609678 442 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC008432.1-201ENST00000615912 1320 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 OR10J6P-201ENST00000289731 930 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 RNU1-87P-201ENST00000363727 170 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 Y_RNA.318-201ENST00000365131 97 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CACNA1FO60840 Y_RNA.472-201ENST00000384322 102 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AL603766.1-201ENST00000407763 664 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AL358794.1-201ENST00000445689 381 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CACNA1FO60840 BET1P1-201ENST00000482276 359 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 RN7SKP43-201ENST00000516173 320 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC107952.2-201ENST00000606048 486 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.91□□□□□ -1.78
CACNA1FO60840 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.91□□□□□ -1.78
CACNA1FO60840 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.91□□□□□ -1.78
CACNA1FO60840 AC083865.1-201ENST00000636634 831 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 AP003122.5-201ENST00000527668 3766 ntBASIC3.91□□□□□ -1.78
CACNA1FO60840 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CACNA1FO60840 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
CACNA1FO60840 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CACNA1FO60840 SRP72P2-201ENST00000344851 1979 ntBASIC3.9□□□□□ -1.78
CACNA1FO60840 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.79
CACNA1FO60840 OR1S2-201ENST00000302592 978 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 RNA5SP383-201ENST00000362934 120 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 RNU6-1005P-201ENST00000384519 107 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 SNORA46-201ENST00000384762 135 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA1FO60840 USP9YP24-201ENST00000434374 697 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.9□□□□□ -1.79
CACNA1FO60840 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.9□□□□□ -1.79
CACNA1FO60840 USP9YP17-201ENST00000444617 696 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 RPL27AP5-201ENST00000469428 449 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA1FO60840 Y_RNA.688-201ENST00000516565 95 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 CBX3P2-202ENST00000583365 535 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA1FO60840 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.9□□□□□ -1.79
CACNA1FO60840 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CACNA1FO60840 AC139713.2-210ENST00000641741 992 ntBASIC3.9□□□□□ -1.79
CACNA1FO60840 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CACNA1FO60840 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CACNA1FO60840 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA1FO60840 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CACNA1FO60840 OR5H2-201ENST00000355273 945 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CACNA1FO60840 RPL23AP48-201ENST00000406913 488 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA1FO60840 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AL513175.2-201ENST00000422071 443 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 BX119904.4-201ENST00000424402 301 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AL450263.2-201ENST00000439400 589 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms