RNA–Protein interactions for RNA: ENST00000559425.1

NDUFAF4P1-201, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 1, humanhuman

BASIC

Gene NDUFAF4P1, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF4P1-201ENST00000559425 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
NDUFAF4P1-201ENST00000559425 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
NDUFAF4P1-201ENST00000559425 SENP3Q9H4L4 574 aaPredicted RBP24.36■■□□□ 1.49
NDUFAF4P1-201ENST00000559425 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
NDUFAF4P1-201ENST00000559425 FOXD1Q16676 465 aa22.68■■□□□ 1.22
NDUFAF4P1-201ENST00000559425 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
NDUFAF4P1-201ENST00000559425 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
NDUFAF4P1-201ENST00000559425 ADRA2BP18089 450 aa21.43■■□□□ 1.02
NDUFAF4P1-201ENST00000559425 MSH5O43196 834 aa21.27■■□□□ 1
NDUFAF4P1-201ENST00000559425 PIAS4Q8N2W9 510 aaPredicted RBP21.2■□□□□ 0.98
NDUFAF4P1-201ENST00000559425 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
NDUFAF4P1-201ENST00000559425 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
NDUFAF4P1-201ENST00000559425 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
NDUFAF4P1-201ENST00000559425 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
NDUFAF4P1-201ENST00000559425 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
NDUFAF4P1-201ENST00000559425 CNKSR2Q8WXI2 1034 aa18.88■□□□□ 0.61
NDUFAF4P1-201ENST00000559425 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
NDUFAF4P1-201ENST00000559425 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
NDUFAF4P1-201ENST00000559425 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
NDUFAF4P1-201ENST00000559425 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
NDUFAF4P1-201ENST00000559425 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
NDUFAF4P1-201ENST00000559425 KCNA4P22459 653 aa18.44■□□□□ 0.54
NDUFAF4P1-201ENST00000559425 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
NDUFAF4P1-201ENST00000559425 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
NDUFAF4P1-201ENST00000559425 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
NDUFAF4P1-201ENST00000559425 C1QBPQ07021 282 aaKnown RBP17.89■□□□□ 0.45
NDUFAF4P1-201ENST00000559425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.8■□□□□ 0.44
NDUFAF4P1-201ENST00000559425 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
NDUFAF4P1-201ENST00000559425 U3KPZ7 1027 aaPredicted RBP17.56■□□□□ 0.4
NDUFAF4P1-201ENST00000559425 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
NDUFAF4P1-201ENST00000559425 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
NDUFAF4P1-201ENST00000559425 CAPN15O75808 1086 aa17.09■□□□□ 0.33
NDUFAF4P1-201ENST00000559425 ZBTB22O15209 634 aa17.04■□□□□ 0.32
NDUFAF4P1-201ENST00000559425 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
NDUFAF4P1-201ENST00000559425 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
NDUFAF4P1-201ENST00000559425 DSG3P32926 999 aa16.98■□□□□ 0.31
NDUFAF4P1-201ENST00000559425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
NDUFAF4P1-201ENST00000559425 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
NDUFAF4P1-201ENST00000559425 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
NDUFAF4P1-201ENST00000559425 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
NDUFAF4P1-201ENST00000559425 APLP2Q06481 763 aa16.9■□□□□ 0.3
NDUFAF4P1-201ENST00000559425 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
NDUFAF4P1-201ENST00000559425 ABCB7O75027 752 aa16.8■□□□□ 0.28
NDUFAF4P1-201ENST00000559425 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
NDUFAF4P1-201ENST00000559425 POLA2Q14181 598 aa16.54■□□□□ 0.24
NDUFAF4P1-201ENST00000559425 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
NDUFAF4P1-201ENST00000559425 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
NDUFAF4P1-201ENST00000559425 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
NDUFAF4P1-201ENST00000559425 POTEHQ6S545 545 aa16.27■□□□□ 0.2
NDUFAF4P1-201ENST00000559425 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
NDUFAF4P1-201ENST00000559425 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
NDUFAF4P1-201ENST00000559425 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
NDUFAF4P1-201ENST00000559425 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
NDUFAF4P1-201ENST00000559425 FBLN2P98095 1184 aa15.85■□□□□ 0.13
NDUFAF4P1-201ENST00000559425 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
NDUFAF4P1-201ENST00000559425 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
NDUFAF4P1-201ENST00000559425 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
NDUFAF4P1-201ENST00000559425 SPDYE2BA6NHP3 402 aa15.68■□□□□ 0.1
NDUFAF4P1-201ENST00000559425 SPDYE6P0CI01 402 aa15.68■□□□□ 0.1
NDUFAF4P1-201ENST00000559425 SPDYE2Q495Y8 402 aa15.68■□□□□ 0.1
NDUFAF4P1-201ENST00000559425 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
NDUFAF4P1-201ENST00000559425 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
NDUFAF4P1-201ENST00000559425 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
NDUFAF4P1-201ENST00000559425 PIP4P2Q8N4L2 257 aa15.46■□□□□ 0.07
NDUFAF4P1-201ENST00000559425 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
NDUFAF4P1-201ENST00000559425 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
NDUFAF4P1-201ENST00000559425 CLEC11AQ9Y240 323 aa15.33■□□□□ 0.04
NDUFAF4P1-201ENST00000559425 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
NDUFAF4P1-201ENST00000559425 SPDYE4A6NLX3 237 aa15.27■□□□□ 0.04
NDUFAF4P1-201ENST00000559425 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
NDUFAF4P1-201ENST00000559425 HAX1O00165 279 aa15.2■□□□□ 0.02
NDUFAF4P1-201ENST00000559425 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
NDUFAF4P1-201ENST00000559425 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
NDUFAF4P1-201ENST00000559425 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
NDUFAF4P1-201ENST00000559425 PROM2Q8N271 834 aa15□□□□□ -0.01
NDUFAF4P1-201ENST00000559425 EVX2Q03828 476 aa14.99□□□□□ -0.01
NDUFAF4P1-201ENST00000559425 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
NDUFAF4P1-201ENST00000559425 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
NDUFAF4P1-201ENST00000559425 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
NDUFAF4P1-201ENST00000559425 FKBP8Q14318 412 aa14.86□□□□□ -0.03
NDUFAF4P1-201ENST00000559425 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
NDUFAF4P1-201ENST00000559425 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
NDUFAF4P1-201ENST00000559425 GABBR2O75899 941 aa14.66□□□□□ -0.06
NDUFAF4P1-201ENST00000559425 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
NDUFAF4P1-201ENST00000559425 MIER1Q8N108 512 aa14.5□□□□□ -0.09
NDUFAF4P1-201ENST00000559425 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
NDUFAF4P1-201ENST00000559425 CLCN6P51797 869 aa14.49□□□□□ -0.09
NDUFAF4P1-201ENST00000559425 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
NDUFAF4P1-201ENST00000559425 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
NDUFAF4P1-201ENST00000559425 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
NDUFAF4P1-201ENST00000559425 PHF12Q96QT6 1004 aa14.4□□□□□ -0.1
NDUFAF4P1-201ENST00000559425 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
NDUFAF4P1-201ENST00000559425 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
NDUFAF4P1-201ENST00000559425 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
NDUFAF4P1-201ENST00000559425 GALR2O43603 387 aaPredicted RBP14.32□□□□□ -0.12
NDUFAF4P1-201ENST00000559425 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
NDUFAF4P1-201ENST00000559425 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
NDUFAF4P1-201ENST00000559425 LHX8Q68G74 356 aa14.31□□□□□ -0.12
NDUFAF4P1-201ENST00000559425 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
NDUFAF4P1-201ENST00000559425 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms