Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC009063.1-201ENST00000563342 702 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 AL020991.1-201ENST00000612314 373 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ABCA3Q99758 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ABCA3Q99758 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ABCA3Q99758 AL353743.4-201ENST00000422653 1547 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 AC104454.1-201ENST00000421341 1401 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 AC093909.5-201ENST00000621839 1799 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 OR4G2P-202ENST00000641004 1759 ntBASIC3.37□□□□□ -1.87
ABCA3Q99758 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCA3Q99758 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCA3Q99758 RPL21P3-201ENST00000395517 478 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 EXTL2P1-201ENST00000446218 416 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 RNU7-170P-201ENST00000459303 61 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 AC146507.2-201ENST00000460608 476 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 AC068587.2-201ENST00000478386 781 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 RPL21P99-201ENST00000480369 423 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 AC118282.1-201ENST00000506408 765 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ABCA3Q99758 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.36□□□□□ -1.87
ABCA3Q99758 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.36□□□□□ -1.87
ABCA3Q99758 AL355836.1-201ENST00000555951 870 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCA3Q99758 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ABCA3Q99758 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ABCA3Q99758 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ABCA3Q99758 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ABCA3Q99758 RPL21P132-201ENST00000331267 462 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 RNA5SP99-201ENST00000364020 114 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 AC004987.3-201ENST00000413879 771 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCA3Q99758 AC068305.1-201ENST00000497406 726 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ABCA3Q99758 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCA3Q99758 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCA3Q99758 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCA3Q99758 AC007423.1-201ENST00000605009 627 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCA3Q99758 AC026634.1-201ENST00000634369 198 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 CRYM-AS1-204ENST00000637983 556 ntBASIC3.36□□□□□ -1.87
ABCA3Q99758 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ABCA3Q99758 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ABCA3Q99758 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ABCA3Q99758 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
ABCA3Q99758 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
ABCA3Q99758 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ABCA3Q99758 AC009302.1-201ENST00000417147 390 ntBASIC3.35□□□□□ -1.87
ABCA3Q99758 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
ABCA3Q99758 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
ABCA3Q99758 AC016687.1-201ENST00000482574 353 ntBASIC3.35□□□□□ -1.87
ABCA3Q99758 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ABCA3Q99758 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.35□□□□□ -1.87
ABCA3Q99758 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.35□□□□□ -1.87
ABCA3Q99758 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.35□□□□□ -1.87
ABCA3Q99758 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.35□□□□□ -1.87
ABCA3Q99758 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.35□□□□□ -1.87
ABCA3Q99758 MIR3605-201ENST00000583214 100 ntBASIC3.35□□□□□ -1.87
ABCA3Q99758 AC010928.3-201ENST00000587712 541 ntBASIC3.35□□□□□ -1.87
ABCA3Q99758 AC123768.4-201ENST00000616244 701 ntBASIC3.35□□□□□ -1.87
ABCA3Q99758 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCA3Q99758 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ABCA3Q99758 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ABCA3Q99758 Y_RNA.40-201ENST00000362645 93 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 RNU1-87P-201ENST00000363727 170 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 SNORA62.2-201ENST00000364672 152 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCA3Q99758 HMGB3P8-201ENST00000449709 577 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 AC239798.3-201ENST00000454459 408 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 NIPA2P2-201ENST00000496376 1083 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.34□□□□□ -1.87
ABCA3Q99758 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCA3Q99758 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCA3Q99758 AL109741.3-201ENST00000561748 592 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 NRBF2P1-201ENST00000587407 859 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 AC011492.1-201ENST00000600023 315 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCA3Q99758 NF1P10-201ENST00000613227 742 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.34□□□□□ -1.87
ABCA3Q99758 AC110994.2-201ENST00000635481 492 ntBASIC3.34□□□□□ -1.87
ABCA3Q99758 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ABCA3Q99758 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ABCA3Q99758 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ABCA3Q99758 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ABCA3Q99758 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ABCA3Q99758 XIAPP3-201ENST00000312918 795 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AL355379.1-201ENST00000405542 640 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCA3Q99758 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ABCA3Q99758 PTP4A1P1-201ENST00000420539 515 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AL159169.1-201ENST00000421119 127 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ABCA3Q99758 CKS1BP2-201ENST00000497342 240 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AC092436.1-201ENST00000506450 503 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCA3Q99758 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCA3Q99758 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCA3Q99758 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ABCA3Q99758 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCA3Q99758 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms