Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC009108.3-201ENST00000602739 3515 ntBASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 AL080317.3-201ENST00000607434 4315 ntBASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP4-9Q9BYQ8 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 SNORD45.1-201ENST00000363181 77 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RN7SKP15-201ENST00000364742 309 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RNU6-811P-201ENST00000384069 107 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 MIR551B-201ENST00000384984 96 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RNA5SP18-201ENST00000390935 121 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AL355796.1-201ENST00000406706 323 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RNA5SP511-201ENST00000410487 115 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RN7SKP200-201ENST00000410564 320 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC013429.1-201ENST00000456604 422 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RN7SL218P-201ENST00000464637 299 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 SNRPCP11-201ENST00000492453 205 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RN7SL516P-201ENST00000496127 297 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RNU6-63P-201ENST00000516690 95 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC018442.3-201ENST00000523025 183 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RN7SL66P-201ENST00000582099 264 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 MIR3675-201ENST00000583661 73 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 RPSAP66-201ENST00000592196 606 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC243960.5-201ENST00000597858 255 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 MIR6761-201ENST00000617899 72 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC091932.4-201ENST00000623386 200 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AP000787.3-201ENST00000634407 307 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 AC123769.1-201ENST00000530992 3192 ntBASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP4-9Q9BYQ8 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms