Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC023509.5-201ENST00000617434 807 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 BX005214.3-202ENST00000619809 325 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 uc_338.10-201ENST00000621872 182 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC073869.6-201ENST00000640656 341 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AL008638.3-201ENST00000623027 5182 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.219-201ENST00000364232 113 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 GNG5P2-201ENST00000372054 207 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 RNU6-1074P-201ENST00000383995 104 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 RNU6-279P-201ENST00000391297 101 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 MTND3P20-201ENST00000407663 186 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 RPS20P1-201ENST00000434853 354 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC092427.1-201ENST00000439177 601 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 PSAT1P4-201ENST00000466500 526 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 RPS6P4-201ENST00000494693 758 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 TPM3P3-201ENST00000521343 354 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC083923.1-201ENST00000523708 376 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 DUXAP1-201ENST00000556632 463 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 AC012254.5-201ENST00000623573 478 ntBASIC1.55□□□□□ -2.16
HMCN1Q96RW7 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC1.55□□□□□ -2.16
HMCN1Q96RW7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.98-201ENST00000363109 102 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.193-201ENST00000363979 102 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.296-201ENST00000364930 108 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 U3.39-201ENST00000408569 239 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 HMGB1P11-201ENST00000413899 637 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RPL21P40-201ENST00000428586 483 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL096829.2-201ENST00000446582 742 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 HMGB1P16-201ENST00000447155 540 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SNORA31.8-201ENST00000516327 108 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNA5SP291-201ENST00000517222 105 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 MTND1P35-201ENST00000526739 508 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SNORA51-201ENST00000606420 132 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AP004607.9-201ENST00000618202 316 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC026367.3-201ENST00000619032 590 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 MIR8059-201ENST00000620427 81 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL159972.1-201ENST00000625150 448 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNA5SP428-201ENST00000365129 132 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms