Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXD12P35452 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD12P35452 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD12P35452 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 MAPK10-320ENST00000641462 6696 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD12P35452 MIR383-201ENST00000362257 73 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 RNU6-374P-201ENST00000364146 108 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 RNU4-75P-201ENST00000364621 146 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 Y_RNA.559-201ENST00000384686 107 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AL023807.1-201ENST00000407932 359 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 MTCO3P41-201ENST00000414801 328 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 RPL23AP39-201ENST00000415533 405 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 MTCYBP38-201ENST00000417160 1123 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 CYP4F29P-201ENST00000420685 446 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 AL049610.1-201ENST00000423374 372 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 NANOGP6-201ENST00000429190 847 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD12P35452 OR4C10P-201ENST00000434991 931 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 USP9YP28-201ENST00000435142 589 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXD12P35452 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 ISCUP1-201ENST00000454451 448 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 ARPC3P2-201ENST00000457786 533 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC010301.1-201ENST00000473936 355 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 RN7SL604P-201ENST00000492589 296 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 MTCYBP43-201ENST00000513621 740 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 RN7SKP116-201ENST00000516902 319 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC060788.1-201ENST00000521318 469 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC090502.2-201ENST00000549267 280 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC034105.4-201ENST00000568304 277 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 AC020914.6-201ENST00000594327 272 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC113403.1-201ENST00000604910 193 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC128687.1-201ENST00000605304 619 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AL591034.3-201ENST00000605511 685 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC092354.1-201ENST00000606057 376 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AL031775.1-201ENST00000607014 887 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC106028.5-201ENST00000610332 395 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 uc_338.13-201ENST00000618243 179 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AL356266.1-201ENST00000623311 483 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 AC092656.1-203ENST00000624134 423 ntBASIC4.47□□□□□ -1.69
HOXD12P35452 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD12P35452 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXD12P35452 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD12P35452 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXD12P35452 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD12P35452 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.46□□□□□ -1.69
HOXD12P35452 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.46□□□□□ -1.69
HOXD12P35452 AC092104.1-201ENST00000497346 1441 ntBASIC4.46□□□□□ -1.69
HOXD12P35452 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXD12P35452 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
HOXD12P35452 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXD12P35452 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXD12P35452 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXD12P35452 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
HOXD12P35452 MTND5P24-201ENST00000438892 1767 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 AL359893.1-201ENST00000447628 1580 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 ZNF37BP-203ENST00000452306 1352 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 RPL21P132-201ENST00000331267 462 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 RNU4-21P-201ENST00000362802 126 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 RNVU1-3-201ENST00000364313 161 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 RNU6-660P-201ENST00000364566 109 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 AL359837.1-201ENST00000381357 287 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 Y_RNA.505-201ENST00000384489 102 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 MIR506-201ENST00000384998 124 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 RPL32P23-201ENST00000397237 405 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 ARL4AP5-201ENST00000404372 599 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXD12P35452 RNU2-28P-201ENST00000410457 189 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 AL133384.1-201ENST00000412744 351 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 OFD1P18Y-201ENST00000420889 959 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 AC006366.1-201ENST00000422002 759 ntBASIC4.46□□□□□ -1.7
HOXD12P35452 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXD12P35452 RPL23AP38-201ENST00000423801 469 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms