Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC068287.1-201ENST00000430283 295 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXD11P31277 Z97634.1-203ENST00000435229 471 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXD11P31277 AL034399.1-201ENST00000451535 380 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXD11P31277 AC114728.1-201ENST00000488289 483 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXD11P31277 AC027308.1-201ENST00000517993 110 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AC116917.1-201ENST00000520558 305 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC8.05□□□□□ -1.12
HOXD11P31277 AP000435.1-201ENST00000528539 496 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AC007229.1-201ENST00000590455 412 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 OR1X1P-201ENST00000606159 931 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AL121809.2-201ENST00000613169 341 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 5S_rRNA.11-201ENST00000618635 84 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXD11P31277 AC211486.4-201ENST00000621495 113 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXD11P31277 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
HOXD11P31277 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
HOXD11P31277 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HOXD11P31277 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC8.05□□□□□ -1.12
HOXD11P31277 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
HOXD11P31277 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
HOXD11P31277 RPL23P2-201ENST00000320371 421 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 STAG3L4-201ENST00000352103 530 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 RNU4-41P-201ENST00000364426 143 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
HOXD11P31277 AL161787.1-201ENST00000401543 174 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 RN7SKP110-201ENST00000410146 285 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 LIN28AP2-201ENST00000445283 458 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 NDUFS5P3-201ENST00000450668 321 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXD11P31277 RPL31P11-202ENST00000454082 372 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 NDUFS5P2-201ENST00000484004 306 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXD11P31277 HMGN2P36-201ENST00000529541 409 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 MED28P6-201ENST00000558776 231 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 AL137067.1-201ENST00000615933 120 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 AL138880.2-201ENST00000616214 239 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 AC008957.3-201ENST00000624112 2242 ntBASIC8.04□□□□□ -1.12
HOXD11P31277 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
HOXD11P31277 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
HOXD11P31277 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXD11P31277 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
HOXD11P31277 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXD11P31277 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXD11P31277 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 FOLH1B-202ENST00000529567 2145 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
HOXD11P31277 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXD11P31277 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
HOXD11P31277 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXD11P31277 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXD11P31277 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
HOXD11P31277 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 MIR624-201ENST00000385217 97 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 Z85995.1-201ENST00000415547 335 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 AC118758.1-202ENST00000454719 225 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 AC114781.3-201ENST00000512083 142 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 AC022254.1-201ENST00000567857 235 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 AL161931.1-201ENST00000612768 246 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXD11P31277 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXD11P31277 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXD11P31277 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 AL591543.1-202ENST00000642095 4149 ntBASIC8.03□□□□□ -1.12
HOXD11P31277 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXD11P31277 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXD11P31277 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXD11P31277 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
HOXD11P31277 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
HOXD11P31277 NF1P1-201ENST00000604105 2645 ntBASIC8.02□□□□□ -1.12
HOXD11P31277 AL589993.1-201ENST00000407450 2524 ntBASIC8.02□□□□□ -1.12
HOXD11P31277 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms