Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD11P31277 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.08□□□□□ -1.12
HOXD11P31277 AC016251.1-201ENST00000624299 4198 ntBASIC8.08□□□□□ -1.12
HOXD11P31277 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC8.08□□□□□ -1.12
HOXD11P31277 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD11P31277 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD11P31277 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 AP001528.3-201ENST00000624364 3249 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD11P31277 AC016251.2-201ENST00000623393 3089 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD11P31277 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 U3.15-201ENST00000365398 212 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 AC007919.1-201ENST00000429380 217 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 RPEP4-201ENST00000437636 602 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
HOXD11P31277 AL354714.3-201ENST00000447284 493 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 AL451050.1-201ENST00000450126 415 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
HOXD11P31277 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.07□□□□□ -1.12
HOXD11P31277 AC090132.2-201ENST00000615881 347 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.07□□□□□ -1.12
HOXD11P31277 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD11P31277 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
HOXD11P31277 AC091544.5-201ENST00000620192 3815 ntBASIC8.07□□□□□ -1.12
HOXD11P31277 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
HOXD11P31277 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
HOXD11P31277 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD11P31277 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXD11P31277 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 AC132825.3-201ENST00000562182 4710 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC131392.2-201ENST00000505635 4332 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 USP30-203ENST00000392784 2483 ntTSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
HOXD11P31277 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 AL033519.1-201ENST00000407266 307 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 RNA5SP127-201ENST00000411051 133 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 RN7SKP101-201ENST00000411376 320 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC007064.1-201ENST00000412238 351 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC007969.2-201ENST00000441891 191 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AL358232.1-201ENST00000448030 501 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXD11P31277 RPL26P9-201ENST00000457466 433 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC022730.2-201ENST00000465359 452 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 RNA5SP153-201ENST00000516498 76 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC106028.1-201ENST00000554322 526 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 AC074050.1-201ENST00000563247 211 ntBASIC8.06□□□□□ -1.12
HOXD11P31277 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.06□□□□□ -1.12
HOXD11P31277 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
HOXD11P31277 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD11P31277 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.06□□□□□ -1.12
HOXD11P31277 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 AL672296.1-201ENST00000427780 2158 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
HOXD11P31277 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXD11P31277 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.05□□□□□ -1.12
HOXD11P31277 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HOXD11P31277 RNA5SP463-201ENST00000363030 120 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 MIR518C-201ENST00000384822 101 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 RNA5SP209-201ENST00000411237 97 ntBASIC8.05□□□□□ -1.12
HOXD11P31277 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.05□□□□□ -1.12
HOXD11P31277 AC008065.1-201ENST00000428525 348 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 283.9 ms