Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC108729.2-201ENST00000476543 840 ntBASIC3.41□□□□□ -1.86
RETP07949 AC012181.1-201ENST00000479895 423 ntBASIC3.41□□□□□ -1.86
RETP07949 MTND4LP22-201ENST00000508209 276 ntBASIC3.41□□□□□ -1.86
RETP07949 COL6A4P2-205ENST00000509855 506 ntBASIC3.41□□□□□ -1.86
RETP07949 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
RETP07949 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
RETP07949 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.41□□□□□ -1.86
RETP07949 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
RETP07949 CBX3P2-202ENST00000583365 535 ntBASIC3.41□□□□□ -1.86
RETP07949 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.41□□□□□ -1.86
RETP07949 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.41□□□□□ -1.86
RETP07949 AC011492.1-201ENST00000600023 315 ntBASIC3.41□□□□□ -1.86
RETP07949 AC009948.4-201ENST00000604692 675 ntBASIC3.41□□□□□ -1.86
RETP07949 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.41□□□□□ -1.86
RETP07949 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RETP07949 AC022149.2-201ENST00000621061 203 ntBASIC3.41□□□□□ -1.86
RETP07949 AC073592.7-201ENST00000623659 507 ntBASIC3.41□□□□□ -1.86
RETP07949 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
RETP07949 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RETP07949 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
RETP07949 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RETP07949 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.41□□□□□ -1.86
RETP07949 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RETP07949 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RETP07949 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RETP07949 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RETP07949 MTND4P21-201ENST00000453886 1357 ntBASIC3.4□□□□□ -1.86
RETP07949 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RETP07949 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RETP07949 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RETP07949 SNORA51.2-201ENST00000364595 132 ntBASIC3.4□□□□□ -1.87
RETP07949 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.87
RETP07949 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RETP07949 AC004022.2-201ENST00000413824 193 ntBASIC3.4□□□□□ -1.87
RETP07949 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
RETP07949 MTATP6P11-201ENST00000428071 670 ntBASIC3.4□□□□□ -1.87
RETP07949 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.4□□□□□ -1.87
RETP07949 PTP4A1P3-201ENST00000433661 420 ntBASIC3.4□□□□□ -1.87
RETP07949 ELOCP11-201ENST00000436690 332 ntBASIC3.4□□□□□ -1.87
RETP07949 ELOCP16-201ENST00000444494 332 ntBASIC3.4□□□□□ -1.87
RETP07949 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 AC233982.1-201ENST00000451247 436 ntBASIC3.4□□□□□ -1.87
RETP07949 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.4□□□□□ -1.87
RETP07949 AC084357.1-201ENST00000473404 255 ntBASIC3.4□□□□□ -1.87
RETP07949 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RETP07949 AC006445.1-201ENST00000491925 405 ntBASIC3.4□□□□□ -1.87
RETP07949 PRELID3BP6-201ENST00000503839 571 ntBASIC3.4□□□□□ -1.87
RETP07949 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 SNORA31.13-201ENST00000516624 135 ntBASIC3.4□□□□□ -1.87
RETP07949 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.4□□□□□ -1.87
RETP07949 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.4□□□□□ -1.87
RETP07949 OR6C73P-201ENST00000546432 358 ntBASIC3.4□□□□□ -1.87
RETP07949 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 AL157394.1-201ENST00000562983 1224 ntBASIC3.4□□□□□ -1.87
RETP07949 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.4□□□□□ -1.87
RETP07949 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.4□□□□□ -1.87
RETP07949 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.4□□□□□ -1.87
RETP07949 AC069304.3-201ENST00000603938 1084 ntBASIC3.4□□□□□ -1.87
RETP07949 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RETP07949 MIR6715A-201ENST00000615929 79 ntBASIC3.4□□□□□ -1.87
RETP07949 AC026422.1-201ENST00000623961 452 ntBASIC3.4□□□□□ -1.87
RETP07949 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RETP07949 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
RETP07949 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.87
RETP07949 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RETP07949 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
RETP07949 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RETP07949 AC117529.2-201ENST00000512159 2068 ntBASIC3.39□□□□□ -1.87
RETP07949 SNORD51.1-201ENST00000365405 77 ntBASIC3.39□□□□□ -1.87
RETP07949 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
RETP07949 SNORA70E-201ENST00000384492 135 ntBASIC3.39□□□□□ -1.87
RETP07949 SNORA44-201ENST00000384584 132 ntBASIC3.39□□□□□ -1.87
RETP07949 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RETP07949 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
RETP07949 HMGN1P24-201ENST00000412282 298 ntBASIC3.39□□□□□ -1.87
RETP07949 AC004987.3-201ENST00000413879 771 ntBASIC3.39□□□□□ -1.87
RETP07949 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.39□□□□□ -1.87
RETP07949 SDCBPP2-201ENST00000424643 885 ntBASIC3.39□□□□□ -1.87
RETP07949 FAR1P1-201ENST00000427163 934 ntBASIC3.39□□□□□ -1.87
RETP07949 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.39□□□□□ -1.87
RETP07949 ARPC3P2-201ENST00000457786 533 ntBASIC3.39□□□□□ -1.87
RETP07949 AC091179.1-201ENST00000461606 579 ntBASIC3.39□□□□□ -1.87
RETP07949 AC004924.1-201ENST00000480160 781 ntBASIC3.39□□□□□ -1.87
RETP07949 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.39□□□□□ -1.87
RETP07949 RN7SKP234-201ENST00000517173 224 ntBASIC3.39□□□□□ -1.87
RETP07949 IGKV2-36-201ENST00000519999 223 ntBASIC3.39□□□□□ -1.87
RETP07949 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
RETP07949 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.39□□□□□ -1.87
RETP07949 AC087276.1-201ENST00000529659 480 ntBASIC3.39□□□□□ -1.87
RETP07949 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.39□□□□□ -1.87
RETP07949 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.39□□□□□ -1.87
RETP07949 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
RETP07949 IGHV3-29-201ENST00000604817 344 ntBASIC3.39□□□□□ -1.87
RETP07949 AL451074.6-201ENST00000608512 729 ntBASIC3.39□□□□□ -1.87
RETP07949 AC006023.2-201ENST00000609916 167 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms