Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 KRT18P31-201ENST00000506277 1292 ntBASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 TPSP2-201ENST00000561760 610 ntBASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 KRT18P13-201ENST00000400056 1290 ntBASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 LINC00265-3P-201ENST00000447588 903 ntBASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCH2Q9Y6C5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 AC093525.10-201ENST00000625130 1569 ntBASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCH2Q9Y6C5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 AC024243.1-201ENST00000609234 778 ntBASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 BX640515.1-201ENST00000617215 977 ntBASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 AC117500.6-201ENST00000624871 588 ntBASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCH2Q9Y6C5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PTCH2Q9Y6C5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 DRAXINP1-201ENST00000437611 948 ntBASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 AL121912.1-201ENST00000603683 238 ntBASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 HLA-A-201ENST00000376802 1334 ntBASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 AF106564.1-201ENST00000607058 2553 ntBASIC21.7■■□□□ 1.06
PTCH2Q9Y6C5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms