Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 AC113347.1-201ENST00000413321 391 ntBASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 YBX1P10-201ENST00000444752 975 ntBASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 FSCN1P1-201ENST00000568912 1481 ntBASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGA6Q9Y5G7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 KRT16P6-202ENST00000425692 1426 ntBASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 AL445228.2-201ENST00000605589 952 ntBASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 AC010947.1-201ENST00000623454 693 ntBASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 TFP1-202ENST00000475455 1573 ntBASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA6Q9Y5G7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 AC005521.1-201ENST00000393351 872 ntBASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 AL590326.2-201ENST00000625139 305 ntBASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 CYP2D8P-201ENST00000433633 1490 ntBASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA6Q9Y5G7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 AL390955.1-201ENST00000428694 934 ntBASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 KRT18P16-201ENST00000510337 1294 ntBASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 DGCR10-201ENST00000609839 495 ntBASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 AL691432.2-201ENST00000607222 2038 ntBASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 TMEM179-206ENST00000616017 1645 ntBASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms