Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 WIZP1-201ENST00000531444 2299 ntBASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHTOPQ9Y3Y2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 AC006333.2-201ENST00000607957 2099 ntBASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 SERBP1P1-201ENST00000396021 1160 ntBASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 AL356740.2-201ENST00000601559 647 ntBASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 AC012354.3-201ENST00000623734 483 ntBASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 AL161938.1-201ENST00000569833 2180 ntBASIC13.78□□□□□ -0.2
CHTOPQ9Y3Y2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CHTOPQ9Y3Y2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CHTOPQ9Y3Y2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHTOPQ9Y3Y2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.77□□□□□ -0.21
CHTOPQ9Y3Y2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms