Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 AC091874.3-201ENST00000512672 1195 ntBASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3HCC1Q9Y3T6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 CROCCP3-202ENST00000420820 1947 ntBASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
R3HCC1Q9Y3T6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 KRT8P36-201ENST00000489121 1440 ntBASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HCC1Q9Y3T6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 AC099398.1-201ENST00000567919 2776 ntBASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
R3HCC1Q9Y3T6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
R3HCC1Q9Y3T6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms