Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 SMUG1P1-201ENST00000590640 811 ntBASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 AC009237.3-201ENST00000393279 1427 ntBASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 AC026271.2-201ENST00000428091 497 ntBASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 AL354811.1-201ENST00000610286 706 ntBASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 MIR5787-201ENST00000611784 55 ntBASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 TEX21P-204ENST00000641479 1693 ntBASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
LRCH1Q9Y2L9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 GNAS-203ENST00000306120 1878 ntBASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 MIR6821-201ENST00000617625 74 ntBASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH1Q9Y2L9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AC116050.2-201ENST00000612102 1779 ntBASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms