Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 AC092368.3-202ENST00000574180 1591 ntBASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 FP475955.4-201ENST00000623131 1990 ntBASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 KRT8P8-201ENST00000434750 1448 ntBASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP2BQ9UQN3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP2BQ9UQN3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP2BQ9UQN3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms