Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 AC069148.1-201ENST00000608741 768 ntBASIC25.11■■□□□ 1.61
SPG7Q9UQ90 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.11■■□□□ 1.61
SPG7Q9UQ90 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 CR769767.2-201ENST00000622735 460 ntBASIC25.1■■□□□ 1.61
SPG7Q9UQ90 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 LINC01311-201ENST00000565162 1445 ntBASIC25.1■■□□□ 1.61
SPG7Q9UQ90 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.1■■□□□ 1.61
SPG7Q9UQ90 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 ZNF815P-204ENST00000434898 1737 ntBASIC25.09■■□□□ 1.61
SPG7Q9UQ90 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG7Q9UQ90 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 TSPY23P-201ENST00000440136 739 ntBASIC25.08■■□□□ 1.61
SPG7Q9UQ90 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SPG7Q9UQ90 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SPG7Q9UQ90 AC099778.1-201ENST00000568593 1911 ntBASIC25.08■■□□□ 1.6
SPG7Q9UQ90 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
SPG7Q9UQ90 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SPG7Q9UQ90 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms