Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 TSPY21P-201ENST00000433481 731 ntBASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 TSPY23P-201ENST00000440136 739 ntBASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 AL355355.2-201ENST00000442321 338 ntBASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA4Q9UN74 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 REXO1L10P-201ENST00000615707 1290 ntBASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 REXO1L12P-201ENST00000622156 912 ntBASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PCDHA4Q9UN74 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 AP003071.4-201ENST00000562276 1284 ntBASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 MIR4497-201ENST00000583208 89 ntBASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHA4Q9UN74 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 MIR4785-201ENST00000585005 73 ntBASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 KRT8P11-201ENST00000409686 1436 ntBASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA4Q9UN74 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHA4Q9UN74 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHA4Q9UN74 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms