Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 FAM210CP-201ENST00000445714 574 ntBASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 CCR12P-201ENST00000446203 998 ntBASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 CA15P1-201ENST00000481698 905 ntBASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 AC116562.4-202ENST00000641738 218 ntBASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 AC073130.3-201ENST00000624389 2278 ntBASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN1Q9UMX0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.64■□□□□ 0.9
UBQLN1Q9UMX0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 TSPY23P-201ENST00000440136 739 ntBASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN1Q9UMX0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN1Q9UMX0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 AC113347.1-201ENST00000413321 391 ntBASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 SLC25A3P1-201ENST00000443844 931 ntBASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.62■□□□□ 0.89
UBQLN1Q9UMX0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 AL158211.5-201ENST00000623583 2518 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 INGX-201ENST00000359239 846 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 RCN1P1-201ENST00000400413 996 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 TSPY17P-201ENST00000450329 467 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 ECEL1P2-202ENST00000465689 757 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 KRT18P21-201ENST00000515767 1272 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 AL023803.3-201ENST00000615559 522 ntBASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms