Protein–RNA interactions for Protein: Q9UHI6

DDX20, Probable ATP-dependent RNA helicase DDX20, humanhuman

Known RBP Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20Q9UHI6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 AC012313.10-201ENST00000623509 926 ntBASIC21.74■■□□□ 1.07
DDX20Q9UHI6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX20Q9UHI6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 HYMAI.1-201ENST00000620949 238 ntBASIC21.73■■□□□ 1.07
DDX20Q9UHI6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
DDX20Q9UHI6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
DDX20Q9UHI6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 ATP5G2P1-201ENST00000433580 426 ntBASIC21.71■■□□□ 1.07
DDX20Q9UHI6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX20Q9UHI6 LINC01465-201ENST00000408887 1940 ntBASIC21.7■■□□□ 1.07
DDX20Q9UHI6 KRT8P41-201ENST00000533985 1514 ntBASIC21.7■■□□□ 1.07
DDX20Q9UHI6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 STARP1-201ENST00000397973 869 ntBASIC21.7■■□□□ 1.06
DDX20Q9UHI6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 NEK4P2-201ENST00000580004 1012 ntBASIC21.7■■□□□ 1.06
DDX20Q9UHI6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 LINC01311-201ENST00000565162 1445 ntBASIC21.7■■□□□ 1.06
DDX20Q9UHI6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX20Q9UHI6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms