Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 SLC25A1P2-201ENST00000430693 912 ntBASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 MFAP1P1-201ENST00000442257 1255 ntBASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 AC008622.2-201ENST00000617006 1229 ntBASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.31■■□□□ 1.32
MKRN1Q9UHC7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 NPAP1P7-201ENST00000613027 823 ntBASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 AC131212.4-201ENST00000623606 975 ntBASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.3■■□□□ 1.32
MKRN1Q9UHC7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 ZNF444P1-201ENST00000559497 298 ntBASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 AC083849.1-201ENST00000615227 514 ntBASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MKRN1Q9UHC7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 AC112907.2-201ENST00000448639 330 ntBASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
MKRN1Q9UHC7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 AC092338.2-201ENST00000568827 1415 ntBASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MKRN1Q9UHC7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms