Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 HLA-A-209ENST00000638375 975 ntBASIC19.59■□□□□ 0.73
UBP1Q9NZI7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBP1Q9NZI7 AC018445.3-201ENST00000624177 1945 ntBASIC19.59■□□□□ 0.73
UBP1Q9NZI7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBP1Q9NZI7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 AL359736.2-201ENST00000621992 437 ntBASIC19.58■□□□□ 0.72
UBP1Q9NZI7 FAM197Y4-202ENST00000622692 608 ntBASIC19.58■□□□□ 0.72
UBP1Q9NZI7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UBP1Q9NZI7 AL049812.1-201ENST00000432563 2267 ntBASIC19.58■□□□□ 0.72
UBP1Q9NZI7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 ABHD17AP1-201ENST00000358206 933 ntBASIC19.57■□□□□ 0.72
UBP1Q9NZI7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBP1Q9NZI7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 AC098590.1-201ENST00000468126 897 ntBASIC19.56■□□□□ 0.72
UBP1Q9NZI7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.56■□□□□ 0.72
UBP1Q9NZI7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 AL161938.1-201ENST00000569833 2180 ntBASIC19.55■□□□□ 0.72
UBP1Q9NZI7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBP1Q9NZI7 AC141586.3-201ENST00000562166 1838 ntBASIC19.55■□□□□ 0.72
UBP1Q9NZI7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms