Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.99■□□□□ 0.63
MKS1Q9NXB0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.99■□□□□ 0.63
MKS1Q9NXB0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MKS1Q9NXB0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 AC073592.3-201ENST00000625118 1834 ntBASIC18.97■□□□□ 0.63
MKS1Q9NXB0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 BX276092.2-201ENST00000417668 665 ntBASIC18.97■□□□□ 0.63
MKS1Q9NXB0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MKS1Q9NXB0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms