Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RLIMQ9NVW2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 AC009113.1-201ENST00000570267 2443 ntBASIC17.9■□□□□ 0.46
RLIMQ9NVW2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RLIMQ9NVW2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 ZNF815P-204ENST00000434898 1737 ntBASIC17.89■□□□□ 0.46
RLIMQ9NVW2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RLIMQ9NVW2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 UNC93B4-201ENST00000505679 747 ntBASIC17.89■□□□□ 0.45
RLIMQ9NVW2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RLIMQ9NVW2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 ID1-201ENST00000376105 1233 ntBASIC17.88■□□□□ 0.45
RLIMQ9NVW2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 YBX1P10-201ENST00000444752 975 ntBASIC17.88■□□□□ 0.45
RLIMQ9NVW2 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RLIMQ9NVW2 AC005082.1-201ENST00000413042 2259 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms