Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
LIN7CQ9NUP9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 AC116351.2-201ENST00000606540 1585 ntBASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 RNA5SP413-201ENST00000516373 109 ntBASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIN7CQ9NUP9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 CD99P1-205ENST00000527459 561 ntBASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 PNMA6B-201ENST00000538162 1200 ntBASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LIN7CQ9NUP9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.96■□□□□ 0.14
LIN7CQ9NUP9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LIN7CQ9NUP9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 AC005829.2-201ENST00000571422 1056 ntBASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 AC141586.3-201ENST00000562166 1838 ntBASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms