Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMCO4Q9NRQ5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 DUX4L9-201ENST00000449051 1259 ntBASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 AL596257.1-201ENST00000641463 2694 ntBASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 AL645608.8-201ENST00000606034 2086 ntBASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMCO4Q9NRQ5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMCO4Q9NRQ5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMCO4Q9NRQ5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms