Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC52A3Q9NQ40 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SLC52A3Q9NQ40 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 CROCCP5-201ENST00000436658 830 ntBASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 AC091874.3-201ENST00000512672 1195 ntBASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 AL121906.2-201ENST00000621597 723 ntBASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC52A3Q9NQ40 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 AC092118.2-201ENST00000613495 667 ntBASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 AC018470.1-201ENST00000624790 3129 ntBASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC52A3Q9NQ40 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms