Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 REXO1L10P-201ENST00000615707 1290 ntBASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 AC011298.2-201ENST00000617989 482 ntBASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 REXO1L12P-201ENST00000622156 912 ntBASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 SDHAP1-207ENST00000440850 2000 ntBASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC4Q9HBW1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC4Q9HBW1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 Z82202.1-201ENST00000623446 1880 ntBASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
LRRC4Q9HBW1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC4Q9HBW1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 AC130371.2-201ENST00000619443 611 ntBASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LRRC4Q9HBW1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 MESTP1-201ENST00000404287 994 ntBASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 AC091390.4-202ENST00000476426 537 ntBASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 AL355075.4-201ENST00000554988 638 ntBASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 KRT8P41-201ENST00000533985 1514 ntBASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC4Q9HBW1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC4Q9HBW1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms