Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.59■■□□□ 1.37
UPF2Q9HAU5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPF2Q9HAU5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
UPF2Q9HAU5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
UPF2Q9HAU5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.58■■□□□ 1.36
UPF2Q9HAU5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC23.58■■□□□ 1.36
UPF2Q9HAU5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
UPF2Q9HAU5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
UPF2Q9HAU5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 CYP2T1P-201ENST00000432607 1285 ntBASIC23.57■■□□□ 1.36
UPF2Q9HAU5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 AC093525.10-201ENST00000625130 1569 ntBASIC23.57■■□□□ 1.36
UPF2Q9HAU5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPF2Q9HAU5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 PKD1P1-201ENST00000458669 6805 ntBASIC23.56■■□□□ 1.36
UPF2Q9HAU5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPF2Q9HAU5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 AC034268.1-201ENST00000441047 882 ntBASIC23.55■■□□□ 1.36
UPF2Q9HAU5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 TFP1-202ENST00000475455 1573 ntBASIC23.55■■□□□ 1.36
UPF2Q9HAU5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UPF2Q9HAU5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UPF2Q9HAU5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms