Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 TMEM179-206ENST00000616017 1645 ntBASIC22.38■■□□□ 1.17
EFCC1Q9HA90 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 Z85996.1-201ENST00000494644 937 ntBASIC22.37■■□□□ 1.17
EFCC1Q9HA90 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.37■■□□□ 1.17
EFCC1Q9HA90 AC026310.3-201ENST00000625186 2373 ntBASIC22.36■■□□□ 1.17
EFCC1Q9HA90 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 AC112907.2-201ENST00000448639 330 ntBASIC22.36■■□□□ 1.17
EFCC1Q9HA90 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EFCC1Q9HA90 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 AC083849.1-201ENST00000615227 514 ntBASIC22.35■■□□□ 1.17
EFCC1Q9HA90 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EFCC1Q9HA90 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.34■■□□□ 1.17
EFCC1Q9HA90 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
EFCC1Q9HA90 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.33■■□□□ 1.17
EFCC1Q9HA90 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
EFCC1Q9HA90 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
EFCC1Q9HA90 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
EFCC1Q9HA90 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms