Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 MIR572-201ENST00000384983 95 ntBASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 AC243732.1-201ENST00000612648 864 ntBASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 KRT8P20-201ENST00000423953 1409 ntBASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 AC087633.2-202ENST00000565166 1439 ntBASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 TEX21P-204ENST00000641479 1693 ntBASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MAP1LC3AQ9H492 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 AL355001.2-201ENST00000620617 1191 ntBASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MAP1LC3AQ9H492 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 PTBP1P-201ENST00000554374 1601 ntBASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 PHGDH-210ENST00000641115 1638 ntBASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MAP1LC3AQ9H492 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 SLC7A5P2-201ENST00000553010 536 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L2-201ENST00000561772 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 AC008764.7-201ENST00000593779 1081 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L6-201ENST00000626483 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L1-201ENST00000627662 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L8-201ENST00000629013 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L3-201ENST00000630187 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L7-201ENST00000630678 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 DUX4L5-201ENST00000630834 1275 ntBASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
MAP1LC3AQ9H492 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms