Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 C1QL1P1-201ENST00000568105 661 ntBASIC17.82■□□□□ 0.44
UBQLN3Q9H347 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 TSPY7P-201ENST00000431358 1114 ntBASIC17.81■□□□□ 0.44
UBQLN3Q9H347 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN3Q9H347 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 AC073195.1-201ENST00000607241 877 ntBASIC17.8■□□□□ 0.44
UBQLN3Q9H347 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN3Q9H347 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 NIFKP9-201ENST00000419265 221 ntBASIC17.79■□□□□ 0.44
UBQLN3Q9H347 TUBB8P6-201ENST00000436895 1288 ntBASIC17.79■□□□□ 0.44
UBQLN3Q9H347 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 MIR4785-201ENST00000585005 73 ntBASIC17.79■□□□□ 0.44
UBQLN3Q9H347 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms