Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AL353801.3-201ENST00000609898 542 ntBASIC20.47■□□□□ 0.87
CDH23Q9H251 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH23Q9H251 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH23Q9H251 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH23Q9H251 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH23Q9H251 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH23Q9H251 AC244015.2-201ENST00000616358 1861 ntBASIC20.46■□□□□ 0.87
CDH23Q9H251 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CDH23Q9H251 AC099343.3-201ENST00000605834 2503 ntBASIC20.46■□□□□ 0.87
CDH23Q9H251 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CDH23Q9H251 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH23Q9H251 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH23Q9H251 SAPCD2P3-201ENST00000455031 850 ntBASIC20.46■□□□□ 0.87
CDH23Q9H251 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH23Q9H251 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.46■□□□□ 0.87
CDH23Q9H251 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
CDH23Q9H251 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH23Q9H251 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CDH23Q9H251 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH23Q9H251 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDH23Q9H251 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH23Q9H251 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH23Q9H251 AP005901.3-202ENST00000581653 237 ntBASIC20.45■□□□□ 0.86
CDH23Q9H251 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDH23Q9H251 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH23Q9H251 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH23Q9H251 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH23Q9H251 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH23Q9H251 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 AC026310.3-201ENST00000625186 2373 ntBASIC20.44■□□□□ 0.86
CDH23Q9H251 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 AC036111.1-201ENST00000533973 1582 ntBASIC20.44■□□□□ 0.86
CDH23Q9H251 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH23Q9H251 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 AC034232.1-201ENST00000506026 1064 ntBASIC20.44■□□□□ 0.86
CDH23Q9H251 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH23Q9H251 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH23Q9H251 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 AL691432.2-201ENST00000607222 2038 ntBASIC20.44■□□□□ 0.86
CDH23Q9H251 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH23Q9H251 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH23Q9H251 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH23Q9H251 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
CDH23Q9H251 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH23Q9H251 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH23Q9H251 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH23Q9H251 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH23Q9H251 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH23Q9H251 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 AL139424.1-201ENST00000607572 797 ntBASIC20.43■□□□□ 0.86
CDH23Q9H251 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH23Q9H251 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH23Q9H251 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH23Q9H251 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH23Q9H251 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH23Q9H251 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms