Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 UNC93B4-201ENST00000505679 747 ntBASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 FP475955.4-201ENST00000623131 1990 ntBASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 SDHAP1-207ENST00000440850 2000 ntBASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.82■□□□□ 0.92
NUCKS1Q9H1E3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUCKS1Q9H1E3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 KRT18P16-201ENST00000510337 1294 ntBASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 AC093525.10-201ENST00000625130 1569 ntBASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NUCKS1Q9H1E3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUCKS1Q9H1E3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms