Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC083906.2-201ENST00000511578 360 ntBASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC092368.3-202ENST00000574180 1591 ntBASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHANK2-AS3Q9BTD1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC006970.2-201ENST00000450065 779 ntBASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 KRT18P16-201ENST00000510337 1294 ntBASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 HLA-B-256ENST00000639848 1089 ntBASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHANK2-AS3Q9BTD1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SHANK2-AS3Q9BTD1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 SLC29A4P1-201ENST00000398760 971 ntBASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHANK2-AS3Q9BTD1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms