Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ODF3Q96PU9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ODF3Q96PU9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ODF3Q96PU9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.2□□□□□ -0.14
ODF3Q96PU9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 AP003097.1-201ENST00000530657 1135 ntBASIC14.2□□□□□ -0.14
ODF3Q96PU9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 AC093503.3-201ENST00000624917 2352 ntBASIC14.2□□□□□ -0.14
ODF3Q96PU9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ODF3Q96PU9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.2□□□□□ -0.14
ODF3Q96PU9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 AL355802.2-201ENST00000402069 882 ntBASIC14.19□□□□□ -0.14
ODF3Q96PU9 KRT17P3-201ENST00000420566 1262 ntBASIC14.19□□□□□ -0.14
ODF3Q96PU9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.19□□□□□ -0.14
ODF3Q96PU9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 CROCCP3-202ENST00000420820 1947 ntBASIC14.19□□□□□ -0.14
ODF3Q96PU9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.19□□□□□ -0.14
ODF3Q96PU9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ODF3Q96PU9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 AC006333.2-201ENST00000607957 2099 ntBASIC14.18□□□□□ -0.14
ODF3Q96PU9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 AL160286.2-201ENST00000567150 934 ntBASIC14.18□□□□□ -0.14
ODF3Q96PU9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms