Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 CYP2D8P-201ENST00000433633 1490 ntBASIC21.4■■□□□ 1.02
SCLT1Q96NL6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 AC004951.3-201ENST00000418645 1148 ntBASIC21.4■■□□□ 1.02
SCLT1Q96NL6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 C2orf69P3-201ENST00000565542 1120 ntBASIC21.4■■□□□ 1.02
SCLT1Q96NL6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 AC005363.2-201ENST00000618631 242 ntBASIC21.4■■□□□ 1.02
SCLT1Q96NL6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.4■■□□□ 1.02
SCLT1Q96NL6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
SCLT1Q96NL6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.39■■□□□ 1.01
SCLT1Q96NL6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 KRT18P22-201ENST00000402024 1347 ntBASIC21.38■■□□□ 1.01
SCLT1Q96NL6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 FAM207BP-201ENST00000447172 505 ntBASIC21.38■■□□□ 1.01
SCLT1Q96NL6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SCLT1Q96NL6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 LINC01465-201ENST00000408887 1940 ntBASIC21.37■■□□□ 1.01
SCLT1Q96NL6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 RCN1P1-201ENST00000400413 996 ntBASIC21.37■■□□□ 1.01
SCLT1Q96NL6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 AC010947.1-201ENST00000623454 693 ntBASIC21.37■■□□□ 1.01
SCLT1Q96NL6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SCLT1Q96NL6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCLT1Q96NL6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.36■■□□□ 1.01
SCLT1Q96NL6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms