Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.78■□□□□ 0.76
C9orf72Q96LT7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 AC009113.1-201ENST00000570267 2443 ntBASIC19.77■□□□□ 0.76
C9orf72Q96LT7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf72Q96LT7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
C9orf72Q96LT7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
C9orf72Q96LT7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 UNC93B5-201ENST00000530315 699 ntBASIC19.76■□□□□ 0.75
C9orf72Q96LT7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf72Q96LT7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 TFP1-202ENST00000475455 1573 ntBASIC19.75■□□□□ 0.75
C9orf72Q96LT7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 ZNF815P-204ENST00000434898 1737 ntBASIC19.75■□□□□ 0.75
C9orf72Q96LT7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms